pythonPackages.uranium: add missing dependency on shapely
Needed since 3.5.1: https://github.com/Ultimaker/Uranium/commit/0c6d90b42d29fae5f41c23487e74ae8164b324ac
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Needed since 3.5.1: https://github.com/Ultimaker/Uranium/commit/0c6d90b42d29fae5f41c23487e74ae8164b324ac